euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

9 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip53070 chr2 15030317 15030317 + L1-Ta germline . no 217 .
srip96749 chr5 16225154 16225154 - L1-Ta germline . no 217 .
srip112819 chr6 103458495 103458495 + L1-Ta germline . no 217 .
srip113148 chr6 118482150 118482150 + L1-Ta germline . no 217 SLC35F1
srip116047 chr7 3768571 3768571 + L1-Ta germline . no 217 SDK1
srip120423 chr7 89235751 89235751 + L1-Ta germline . no 217 .
srip124881 chr8 14040521 14040521 + L1-Ta germline . no 217 SGCZ
srip126343 chr8 57795376 57795376 - L1-Ta germline . no 217 .
srip128973 chr8 115551642 115551642 - L1-Ta germline . no 217 .